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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9921957_9922594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9921957 - 9922594

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTGTGTTTTATT

Flanking Amino Acid:

VLANYVHDLAANFVRDEDIG

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

70.6

41.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

80.1

0.68

77.4

36.8

Minor 5ss

38.6

-1.3

3.2

44.2

Minor BPS

52.2

0.15

2.1

74.98

42.6

Associated Gene:

Gene:

CETP

Ensembl Gene ID:

ENSAPLG00000014801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015466

9918629 - 9927402

8774