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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9932365_9932958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9932365 - 9932958

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTCT

5'SS Class:

major

3'SS Sequence:

TTCTCTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

TATTCTCTATTT

Flanking Amino Acid:

VNQDQNNNLQQGGNVDRADD

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.9

Major BPS

0.5

59.3

39.1

Major PPT

0.83

0.7

85.2

27.8

Minor 5ss

45.5

-0.5

3.1

65.8

45.4

Minor BPS

55.5

0.25

1.9

77.69

Associated Gene:

Gene:

HERPUD1

Ensembl Gene ID:

ENSAPLG00000015583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016242

9931343 - 9937276

5934