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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9934522_9935135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9934522 - 9935135

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TTCTGGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

TAAGCCTTACTC

Flanking Amino Acid:

QIYARQYYMQYLASTAASAD

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

77.3

37.6

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

83.2

0.75

0.9

80.2

37.3

Minor 5ss

-0.9

3.1

38.4

Minor BPS

56.6

0.19

1.7

64.14

41.7

Associated Gene:

Gene:

HERPUD1

Ensembl Gene ID:

ENSAPLG00000015583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016242

9931343 - 9937276

5934