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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9936777_9936861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9936777 - 9936861

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAAA

5'SS Class:

major

3'SS Sequence:

ACTTATTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATGTACTTATTT

Flanking Amino Acid:

HQHLEDFLPQQEELHALHLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

70.4

35.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

79.8

0.67

0.8

77.6

35.8

Minor 5ss

31.1

-2.2

3.2

39.8

45.8

Minor BPS

58.4

0.34

1.8

75.29

41.7

Associated Gene:

Gene:

HERPUD1

Ensembl Gene ID:

ENSAPLG00000015583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016242

9931343 - 9937276

5934