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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9936940_9937138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9936940 - 9937138

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGGTC

5'SS Class:

major

3'SS Sequence:

TTCTCCTTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAAAAAATAATC

Flanking Amino Acid:

ELRRIVPGEPPEEEQKLIYC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

67.7

37.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

72.1

0.5

71.1

33.5

Minor 5ss

28.8

-2.4

3.6

41.5

45.4

Minor BPS

41.2

-0.6

1.8

47.73

Associated Gene:

Gene:

HERPUD1

Ensembl Gene ID:

ENSAPLG00000015583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016242

9931343 - 9937276

5934