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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9939142_9941779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9939142 - 9941779

Intron Length:

2638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCAGTAGC

5'SS Class:

major

3'SS Sequence:

TTGTTTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAC

U12 Branch Point Sequence:

ACTGCCTTACTA

Flanking Amino Acid:

PLLRVIIQKKAESDAGVFAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

67.1

44.6

Major BPS

52.2

0.06

1.3

52.8

42.4

Major PPT

81.7

0.71

0.8

76.9

Minor 5ss

31.1

-2.2

2.5

29.5

35.3

Minor BPS

57.2

0.22

1.7

64.95

42.3

Associated Gene:

Gene:

PARD6A

Ensembl Gene ID:

ENSAPLG00000017430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039256

9938321 - 9942567

4247