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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10005287_10008716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10005287 - 10008716

Intron Length:

3430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CAATTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

CTATTCCAAACA

Flanking Amino Acid:

VLMENFRRAIGLRIKETKEV

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

76.2

0.65

39.8

Major PPT

79.4

0.66

0.9

73.4

36.5

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

49.1

-0

64.21

42.2

Associated Gene:

Gene:

RUVBL1

Ensembl Gene ID:

ENSAPLG00000006088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006351

10003691 - 10019821

16131