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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10008869_10010191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10008869 - 10010191

Intron Length:

1323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ACTGTTTTGACC

Flanking Amino Acid:

KTAKGTKQLKLDPSIFESLQ

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.1

40.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

82.2

0.73

0.9

73.6

41.8

Minor 5ss

-0.9

3.1

56.4

Minor BPS

57.2

0.21

1.4

62.42

37.9

Associated Gene:

Gene:

RUVBL1

Ensembl Gene ID:

ENSAPLG00000006088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006351

10003691 - 10019821

16131