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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10011286_10012635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10011286 - 10012635

Intron Length:

1350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTGAC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TGATCTGTAACT

Flanking Amino Acid:

DLDVANARPQGGQDILSMMG

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

66.9

39.2

Major BPS

78.2

0.7

77.9

32.1

Major PPT

0.81

0.6

80.7

31.3

Minor 5ss

37.5

-1.4

3.4

52.1

45.1

Minor BPS

63.2

0.49

81.48

40.1

Associated Gene:

Gene:

RUVBL1

Ensembl Gene ID:

ENSAPLG00000006088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006351

10003691 - 10019821

16131