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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10012700_10013923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10012700 - 10013923

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGAATC

5'SS Class:

major

3'SS Sequence:

TTGGTTCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GAATAACTAACC

Flanking Amino Acid:

LMKPKKTEITDKLRGEINKV

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

73.4

35.5

Major BPS

0.45

0.9

67.6

25.3

Major PPT

78.6

0.64

0.9

73.9

36.8

Minor 5ss

44.3

-0.6

2.8

57.9

40.9

Minor BPS

45.5

-0.3

57.24

39.8

Associated Gene:

Gene:

RUVBL1

Ensembl Gene ID:

ENSAPLG00000006088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006351

10003691 - 10019821

16131