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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10047512_10048368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10047512 - 10048368

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

CATCTCTGAAGT

Flanking Amino Acid:

WMRVILASNRGTLMELGISP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

35.1

Major BPS

0.65

1.1

77.4

37.3

Major PPT

73.2

0.52

1.1

69.6

41.6

Minor 5ss

43.1

-0.8

56.5

47.9

Minor BPS

49.8

0.06

1.8

67.1

43.3

Associated Gene:

Gene:

SEC61A1

Ensembl Gene ID:

ENSAPLG00000005703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005922

10041311 - 10051234

9924