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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10048617_10049264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10048617 - 10049264

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GTCATATCAACA

Flanking Amino Acid:

LPEIQKPERKIQFKEKVLWT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

47.2

-0.2

1.8

58.22

40.9

Associated Gene:

Gene:

SEC61A1

Ensembl Gene ID:

ENSAPLG00000005703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005922

10041311 - 10051234

9924