Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_10174953_10175909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10174953 - 10175909

Intron Length:

957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTTC

5'SS Class:

major

3'SS Sequence:

TCCCTGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCTGTGCTAATC

Flanking Amino Acid:

TVQSQDKTLKVYEEAYHALH

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

73.2

39.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

74.3

0.55

0.9

67.8

37.6

Minor 5ss

43.8

-0.7

2.9

59.3

45.4

Minor BPS

43.9

-0.4

2.3

57.62

42.1

Associated Gene:

Gene:

MGLL

Ensembl Gene ID:

ENSAPLG00000005523

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038627

10079422 - 10176487

97066

ENSAPLT00000038173

10115752 - 10176035

60284

ENSAPLT00000022116

10132639 - 10176035

43397

ENSAPLT00000005734

10116107 - 10176682

60576