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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10222002_10224637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10222002 - 10224637

Intron Length:

2636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

TTTCCCATGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

GTGTGCTCACCA

Flanking Amino Acid:

ILNMSDNIDCEEFRLERGPQ

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

61.8

44.4

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

0.54

70.3

34.9

Minor 5ss

35.6

-1.6

42.1

44.4

Minor BPS

46.1

-0.3

2.2

60.13

45.6

Associated Gene:

Gene:

PODXL2

Ensembl Gene ID:

ENSAPLG00000005040

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005196

10218083 - 10243398

25316