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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10253415_10254285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10253415 - 10254285

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AAACATTTACCT

Flanking Amino Acid:

EVPEKDLVDKARQINIHNLS

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.4

37.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

82.4

0.73

0.8

73.4

37.1

Minor 5ss

30.8

-2.2

3.8

47.7

Minor BPS

-0

1.7

63.2

40.4

Associated Gene:

Gene:

MCM2

Ensembl Gene ID:

ENSAPLG00000004520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038103

10253304 - 10263807

10504

ENSAPLT00000004689

10253304 - 10264248

10945