Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_10254442_10255430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10254442 - 10255430

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCGCC

5'SS Class:

major

3'SS Sequence:

TCTTCTCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCTGGCTCACCT

Flanking Amino Acid:

KFSVMRSMRKTFSRYLSFKR

Intron Amino Acid Position:

802

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

62.1

38.4

Major BPS

52.1

0.05

1.3

41.8

Major PPT

78.7

0.65

0.9

73.1

37.3

Minor 5ss

30.8

-2.2

3.5

41.3

45.5

Minor BPS

42.6

-0.4

2.2

59.08

Associated Gene:

Gene:

MCM2

Ensembl Gene ID:

ENSAPLG00000004520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038103

10253304 - 10263807

10504

ENSAPLT00000004689

10253304 - 10264248

10945