Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_10255614_10256391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10255614 - 10256391

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

CCTTCAGTAAGG

Flanking Amino Acid:

MYSDLRKESMATGSIPITVR

Intron Amino Acid Position:

741

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

72.2

32.1

Major BPS

51.1

0.03

1.6

43.2

Major PPT

75.1

0.56

0.7

72.5

25.7

Minor 5ss

28.5

-2.5

2.7

29.8

36.4

Minor BPS

43.1

-0.6

2.5

51.66

48.6

Associated Gene:

Gene:

MCM2

Ensembl Gene ID:

ENSAPLG00000004520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038103

10253304 - 10263807

10504

ENSAPLT00000004689

10253304 - 10264248

10945