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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10257128_10257305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10257128 - 10257305

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TTCACCTCACAT

Flanking Amino Acid:

GVCLIDEFDKMNDQDRTSIH

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

66.8

0.42

1.1

37.7

Major PPT

84.3

0.77

0.7

80.5

24.8

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

48.6

-0

70.37

45.9

Associated Gene:

Gene:

MCM2

Ensembl Gene ID:

ENSAPLG00000004520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038103

10253304 - 10263807

10504

ENSAPLT00000004689

10253304 - 10264248

10945