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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10257557_10258204_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10257557 - 10258204

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

GTCTCTCCCATT

Flanking Amino Acid:

ALFGGEPKNPGGKHKVRGDI

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.7

34.4

Major BPS

59.9

0.25

1.3

70.1

Major PPT

73.2

0.52

0.9

70.2

40.7

Minor 5ss

35.5

-1.7

3.5

49.2

47.3

Minor BPS

42.5

-0.5

2.1

61.15

43.2

Associated Gene:

Gene:

MCM2

Ensembl Gene ID:

ENSAPLG00000004520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038103

10253304 - 10263807

10504

ENSAPLT00000004689

10253304 - 10264248

10945