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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10258299_10259269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10258299 - 10259269

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGCAT

U12 Branch Point Sequence:

CATTCCCTAGGC

Flanking Amino Acid:

LSKDEQIAEKIFASIAPSIY

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

51.1

0.03

1.5

63.1

44.4

Major PPT

86.7

0.83

0.7

84.4

23.5

Minor 5ss

-2.2

3.2

46.1

Minor BPS

46.6

-0.2

2.2

60.25

44.6

Associated Gene:

Gene:

MCM2

Ensembl Gene ID:

ENSAPLG00000004520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038103

10253304 - 10263807

10504

ENSAPLT00000004689

10253304 - 10264248

10945