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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10260666_10260971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10260666 - 10260971

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAGCAT

U12 Branch Point Sequence:

TGCCCTGCAAGC

Flanking Amino Acid:

LPLVEELRSLRQLHLNQLIR

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

47.3

-0.1

1.4

55.4

40.3

Major PPT

85.1

0.79

0.7

84.2

23.8

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

39.5

-0.8

2.2

48.24

41.8

Associated Gene:

Gene:

MCM2

Ensembl Gene ID:

ENSAPLG00000004520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004689

10253304 - 10264248

10945

ENSAPLT00000038103

10253304 - 10263807

10504