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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10271746_10274243_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10271746 - 10274243

Intron Length:

2498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CCTTTTCGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTATTTTTGATA

Flanking Amino Acid:

SPIFTTFYILVFVVALVGIA

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

70.4

33.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.5

0.6

0.9

72.9

31.9

Minor 5ss

33.4

-1.9

2.7

39.9

32.9

Minor BPS

68.4

0.57

1.1

73.76

31.6

Associated Gene:

Gene:

TPRA1

Ensembl Gene ID:

ENSAPLG00000004211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022015

10268374 - 10282853

14480

ENSAPLT00000004346

10270981 - 10282853

11873

ENSAPLT00000031848

10269243 - 10282853

13611

ENSAPLT00000026656

10269781 - 10282853

13073