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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10278376_10278762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10278376 - 10278762

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

TTTGTCTCAACA

Flanking Amino Acid:

WLASSCFFFLVYSFVVILPK

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

77.1

37.8

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

78.4

0.64

0.9

74.2

35.4

Minor 5ss

36.2

-1.6

2.6

40.8

39.1

Minor BPS

67.6

0.55

1.6

79.1

37.4

Associated Gene:

Gene:

TPRA1

Ensembl Gene ID:

ENSAPLG00000004211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022015

10268374 - 10282853

14480

ENSAPLT00000004346

10270981 - 10282853

11873

ENSAPLT00000031848

10269243 - 10282853

13611

ENSAPLT00000026656

10269781 - 10282853

13073