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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10518094_10519791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10518094 - 10519791

Intron Length:

1698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TGTTTTTTTCCT

Flanking Amino Acid:

GQRGLLQPGRVFVKEGTLMK

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.5

33.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

90.4

0.91

0.6

89.7

18.7

Minor 5ss

32.5

-2

2.7

35.6

40.5

Minor BPS

43.2

-0.4

3.5

75.76

41.1

Associated Gene:

Gene:

FGD5

Ensembl Gene ID:

ENSAPLG00000007924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008272

10453291 - 10540263

86973