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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10548192_10562177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10548192 - 10562177

Intron Length:

13986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATTC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAATGTTTAAAT

Flanking Amino Acid:

ARARLAPAPEVQTVQTSLSE

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

78.4

30.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.6

0.49

1.1

65.3

44.7

Minor 5ss

41.9

-0.9

3.2

45.7

Minor BPS

54.1

0.21

1.8

69.84

40.7

Associated Gene:

Gene:

NR2C2

Ensembl Gene ID:

ENSAPLG00000007538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041507

10547403 - 10589246

41844

ENSAPLT00000041283

10547403 - 10580963

33561