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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10562289_10565059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10562289 - 10565059

Intron Length:

2771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

ATATGTTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

AATCCTTCAATA

Flanking Amino Acid:

SSVGSPQRIQIVTDQQTGQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

79.6

0.67

0.9

72.9

41.5

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

57.5

0.23

1.5

64.96

Associated Gene:

Gene:

NR2C2

Ensembl Gene ID:

ENSAPLG00000007538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041283

10547403 - 10580963

33561

ENSAPLT00000007845

10551407 - 10580963

29557

ENSAPLT00000044915

10551407 - 10580885

29479

ENSAPLT00000044705

10551407 - 10580963

29557

ENSAPLT00000041507

10547403 - 10589246

41844