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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10565261_10566574_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10565261 - 10566574

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACG

5'SS Class:

strong_major

3'SS Sequence:

AATTTTGTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTGTTCTGAAAT

Flanking Amino Acid:

TDNIVPGRIQIVTDSASVER

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

36.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

76.3

0.59

0.9

73.6

40.9

Minor 5ss

35.4

-1.7

2.7

43.2

43.8

Minor BPS

66.3

0.59

1.5

81.92

39.2

Associated Gene:

Gene:

NR2C2

Ensembl Gene ID:

ENSAPLG00000007538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044705

10551407 - 10580963

29557

ENSAPLT00000041507

10547403 - 10589246

41844

ENSAPLT00000041283

10547403 - 10580963

33561

ENSAPLT00000044915

10551407 - 10580885

29479

ENSAPLT00000007845

10551407 - 10580963

29557