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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10566678_10567759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10566678 - 10567759

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATATGCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CATCTGATAACA

Flanking Amino Acid:

YCVVCGDKASGRHYGAVSCE

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

67.5

0.4

0.9

58.9

42.2

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

-0.3

2.2

58.48

40.9

Associated Gene:

Gene:

NR2C2

Ensembl Gene ID:

ENSAPLG00000007538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044705

10551407 - 10580963

29557

ENSAPLT00000041507

10547403 - 10589246

41844

ENSAPLT00000041283

10547403 - 10580963

33561

ENSAPLT00000007845

10551407 - 10580963

29557

ENSAPLT00000044915

10551407 - 10580885

29479