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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10575175_10575672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10575175 - 10575672

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATGGA

5'SS Class:

major

3'SS Sequence:

GTGTTATTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTGTTATTAATA

Flanking Amino Acid:

ARSIPAFQALGQDCNTSLVR

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

65.7

40.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

67.5

0.39

63.1

42.2

Minor 5ss

-2.2

3.2

31.8

42.6

Minor BPS

61.6

0.36

1.6

68.77

37.7

Associated Gene:

Gene:

NR2C2

Ensembl Gene ID:

ENSAPLG00000007538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007845

10551407 - 10580963

29557

ENSAPLT00000044915

10551407 - 10580885

29479

ENSAPLT00000044705

10551407 - 10580963

29557

ENSAPLT00000041507

10547403 - 10589246

41844

ENSAPLT00000041283

10547403 - 10580963

33561