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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10617611_10618638_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

10617611 - 10618638

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCATGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CTCCCATGGAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

59.9

0.25

1.3

70.1

Major PPT

58.6

0.19

1.1

60.7

34.1

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

41.3

-0.8

1.8

43.24

41.8

Associated Gene:

Gene:

TRH

Ensembl Gene ID:

ENSAPLG00000007356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007624

10616058 - 10619545

3488