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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10669787_10727034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10669787 - 10727034

Intron Length:

57248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

TTTCCTCGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGGTCTTTAGTG

Flanking Amino Acid:

VGGEEATAAAIERLEVSSLA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.5

33.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

76.5

0.6

0.9

36.5

Minor 5ss

42.7

-0.8

2.8

58.2

40.5

Minor BPS

57.1

0.08

1.6

59.67

42.9

Associated Gene:

Gene:

TMCC1

Ensembl Gene ID:

ENSAPLG00000007270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040187

10660528 - 10738154

77627

ENSAPLT00000030485

10655004 - 10738154

83151