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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10727970_10735216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10727970 - 10735216

Intron Length:

7247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTCTAATTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATTAAAG

Flanking Amino Acid:

IMQTLQEERYRCERLEEQLN

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

71.7

0.49

0.9

62.5

43.1

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

63.6

0.29

1.8

70.17

42.5

Associated Gene:

Gene:

TMCC1

Ensembl Gene ID:

ENSAPLG00000007270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040187

10660528 - 10738154

77627

ENSAPLT00000030485

10655004 - 10738154

83151