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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10762347_10779623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10762347 - 10779623

Intron Length:

17277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCGG

5'SS Class:

major

3'SS Sequence:

TGTGTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAC

U12 Branch Point Sequence:

CAGCCGCTAACA

Flanking Amino Acid:

GPACEKRNIQLQPEQLDCGA

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

55.4

48.8

Major BPS

51.2

0.03

0.9

58.7

27.5

Major PPT

72.8

0.51

0.9

65.6

36.2

Minor 5ss

29.1

-2.4

3.4

38.7

46.4

Minor BPS

44.3

-0.4

2.3

54.69

43.6

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890