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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10779801_10782738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10779801 - 10782738

Intron Length:

2938

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCGCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

GTCTCAGTGAGT

Flanking Amino Acid:

LGTASGGLLKINLDSAMKVV

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.5

1.15

0.7

85.4

29.9

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

0.65

0.8

72.4

32.4

Minor 5ss

22.7

-3.1

3.8

32.2

42.5

Minor BPS

43.4

-0.4

2.4

64.81

45.7

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890