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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10785358_10785656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10785358 - 10785656

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGTTTG

5'SS Class:

major

3'SS Sequence:

TCCCCAATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TTTTCCCCAATT

Flanking Amino Acid:

PEINIEKENPALIIQINGTI

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

71.8

40.5

Major BPS

70.1

0.5

70.3

31.9

Major PPT

68.7

0.42

0.8

61.9

32.3

Minor 5ss

51.4

0.05

2.4

67.2

Minor BPS

66.8

0.61

1.9

89.35

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890