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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10787432_10788427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10787432 - 10788427

Intron Length:

996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTTGGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTGTTCTCATTG

Flanking Amino Acid:

KRTGNIYPKRACTSCLSTKW

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.3

72.3

39.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.2

0.68

76.9

42.1

Minor 5ss

35.3

-1.7

3.3

44.6

43.6

Minor BPS

46.5

-0.4

1.8

50.42

44.6

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890