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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10788531_10792923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10788531 - 10792923

Intron Length:

4393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTACATAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TTGTACATAACA

Flanking Amino Acid:

SQCEDTLQMKKKIDCPRIVP

Intron Amino Acid Position:

758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

67.6

0.44

1.2

Major PPT

69.1

0.43

63.5

41.4

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

63.9

0.43

1.8

77.67

38.7

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890