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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10793029_10794874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10793029 - 10794874

Intron Length:

1846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAG

U12 Branch Point Sequence:

GGCTCTTCAGCC

Flanking Amino Acid:

ISLANATFSKETALECHFGT

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

63.4

0.33

1.6

73.6

41.8

Major PPT

71.7

0.49

0.7

64.5

24.1

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

48.1

-0.1

1.8

56.15

42.2

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890