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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10805138_10807980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10805138 - 10807980

Intron Length:

2843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTCAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAC

U12 Branch Point Sequence:

TTGTCTTCAAAG

Flanking Amino Acid:

TDINPKKSQISGGRIITLEG

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

27.8

Major BPS

58.2

0.2

1.1

61.4

34.4

Major PPT

69.8

0.45

70.3

34.1

Minor 5ss

35.1

-1.7

3.1

48.3

47.4

Minor BPS

58.2

0.12

1.7

64.83

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006231

10760959 - 10838848

77890

ENSAPLT00000044458

10760959 - 10837303

76345