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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10808072_10808371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10808072 - 10808371

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

CATGTGCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCTTTTTTGATG

Flanking Amino Acid:

MVRGIGREQTSCKVHNDTVI

Intron Amino Acid Position:

1126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

74.3

0.55

69.5

41.3

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

57.1

0.08

1.3

56.5

40.4

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890