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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10808648_10809550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10808648 - 10809550

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGAGAG

5'SS Class:

major

3'SS Sequence:

TTTTTGTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCATCCTGATTT

Flanking Amino Acid:

PGEPLTLVIHKEPDNLGLES

Intron Amino Acid Position:

1218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

40.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

86.4

0.82

0.7

85.6

29.2

Minor 5ss

31.2

-2.2

3.3

37.5

40.6

Minor BPS

57.7

0.32

1.7

73.66

43.3

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890