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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10813253_10814325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10813253 - 10814325

Intron Length:

1073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

TAGTCCAAGAGG

Flanking Amino Acid:

CSILLVLSVVALFVFCTKSR

Intron Amino Acid Position:

1306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

63.3

0.33

1.5

41.2

Major PPT

84.4

0.77

0.7

76.4

32.2

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

-0.7

2.2

48.06

45.4

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890