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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10815250_10816495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10815250 - 10816495

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

TGTTTGGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CCTCTGCTAACG

Flanking Amino Acid:

HFVTRTFFPKCSSLYEECYI

Intron Amino Acid Position:

1380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

68.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

79.2

0.66

72.9

42.2

Minor 5ss

31.8

-2.1

3.3

38.6

40.8

Minor BPS

42.4

-0.7

2.3

48.51

45.1

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890