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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10817843_10818516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10817843 - 10818516

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TCATGCACAATT

Flanking Amino Acid:

EQQKDFAVRDRCNLASLLTI

Intron Amino Acid Position:

1459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.3

34.2

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

86.5

0.82

0.7

84.6

30.3

Minor 5ss

39.2

-1.2

3.4

56.9

47.4

Minor BPS

45.8

-0.2

2.2

65.94

44.7

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890