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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10818716_10824537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10818716 - 10824537

Intron Length:

5822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGATAA

5'SS Class:

major

3'SS Sequence:

TCCCTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GTTTGCTGACAT

Flanking Amino Acid:

MSICMYSYLRETVGEPFFLL

Intron Amino Acid Position:

1526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

67.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

79.3

0.66

0.7

72.1

32.5

Minor 5ss

38.5

-1.3

43.8

44.6

Minor BPS

46.8

-0.1

2.2

71.05

45.2

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890