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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10824685_10826708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10824685 - 10826708

Intron Length:

2024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CGCTCCTCACTC

Flanking Amino Acid:

LRENIEAKPRNLNVSFQGCG

Intron Amino Acid Position:

1575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.3

32.8

Major BPS

72.4

0.56

73.5

32.5

Major PPT

71.4

0.48

0.8

64.9

30.7

Minor 5ss

34.4

-1.8

2.8

37.5

40.1

Minor BPS

47.9

-0.1

1.9

54.76

43.8

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890