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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10830316_10831668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10830316 - 10831668

Intron Length:

1353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TATATTGGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

GCATTCTGAACA

Flanking Amino Acid:

DLDTEKYFHLVLPTDESVEH

Intron Amino Acid Position:

1695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

0.9

76.8

31.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

62.3

0.28

1.2

55.3

48.3

Minor 5ss

36.7

-1.5

2.9

47.4

36.1

Minor BPS

61.8

0.37

1.5

65.68

40.3

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006231

10760959 - 10838848

77890

ENSAPLT00000044458

10760959 - 10837303

76345