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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10831774_10832596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10831774 - 10832596

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

GCTTTCTGCAGG

Flanking Amino Acid:

IYLTRLLSTKGTLQKFLDDL

Intron Amino Acid Position:

1730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

72.1

0.5

0.9

64.8

36.5

Minor 5ss

30.8

-2.2

3.7

47.1

48.3

Minor BPS

42.8

-0.7

2.1

47.98

45.4

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890