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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10832761_10834183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10832761 - 10834183

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGGAAG

5'SS Class:

major

3'SS Sequence:

GTTTCCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

GTTTCCTTTACA

Flanking Amino Acid:

PDTMHIWKTNSLPLRFWVNI

Intron Amino Acid Position:

1784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

63.4

42.2

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

86.4

0.82

0.8

80.2

31.9

Minor 5ss

34.1

-1.8

2.9

39.5

46.1

Minor BPS

77.7

0.87

1.5

84.68

34.6

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890