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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10834332_10836946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10834332 - 10836946

Intron Length:

2615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTCC

5'SS Class:

major

3'SS Sequence:

ATTCTCACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TCATTCTCACTC

Flanking Amino Acid:

CSLSDLQLGKDSPTNKLLYA

Intron Amino Acid Position:

1834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

38.8

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

0.52

0.8

64.3

37.2

Minor 5ss

36.3

-1.6

3.5

45.8

Minor BPS

48.6

-0.1

1.8

58.52

41.1

Associated Gene:

Gene:

PLXND1

Ensembl Gene ID:

ENSAPLG00000005859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044458

10760959 - 10837303

76345

ENSAPLT00000006231

10760959 - 10838848

77890